Cystitis is mostly caused by a bacterial infection, with Escherichia coli (E. coli) the main culprit — a bacterium that normally lives in the gut but causes infection once it reaches the urinary tract.
How the infection happens
Bacteria enter the body through the urethra and travel up to the bladder, a process called an ascending infection — the most common infection route.
E. coli carries surface proteins called fimbriae that let it grip the bladder wall, making it hard for the body to flush out even with frequent urination.
Common Bacteria Found
Bacteria
Prevalence
Characteristics
Escherichia coli
~75-90%
Main cause, from the gut
Staphylococcus saprophyticus
~5-10%
Common in women of reproductive age
Klebsiella pneumoniae
~3-5%
Common in catheterised patients
Proteus mirabilis
~1-3%
More common in men
Enterococcus faecalis
~1-3%
Often multidrug-resistant
📖 What are the symptoms once you're infected? To check what signs point to cystitis, read more at Cystitis Symptoms: What to Look For and check your own symptoms.
Why Do Women Get It More Than Men?
Women are up to 30 times more likely to get cystitis than men, and 50-60% of women will have at least one episode in their lifetime. The main reason is anatomical.
Anatomical differences
A shorter urethra — about 4 cm in women versus around 20 cm in men, so bacteria reach the bladder faster
Urethral position — close to the anus and vagina, both reservoirs of bacteria
Men have a prostate gland — it produces antibacterial substances that give extra protection against infection
Oestrogen and infection
Oestrogen helps maintain a healthy balance of protective vaginal bacteria (Lactobacillus), which keeps the environment acidic enough to hold pathogens back. When oestrogen levels fall, such as at menopause, these protective bacteria decline too, raising the risk of infection.
Risk Factors That Increase Infection Risk
Risk factors fall into several groups, some controllable and some not.
Risk group
Factor
Why
Anatomy
Short urethra (women)
Bacteria reach the bladder more easily
Hormonal
Menopause
Lower oestrogen, fewer protective bacteria
Hormonal
Pregnancy
Enlarged womb presses on the bladder, causing retention
Behavioural
Holding urine often
Retained urine becomes a breeding ground
Behavioural
Drinking too little water
Less flushing of bacteria out
Sexual activity
Frequent intercourse
Bacteria pushed into the urethra
Underlying condition
Diabetes
Weaker immunity; sugar in urine feeds bacteria
Medical
Urinary catheter
A direct route for bacteria to enter
Everyday Habits That Raise Your Risk Without You Realising
Many people have habits that raise their risk without realising it. Check whether any of these apply to you.
🚽 Holding your urine regularly
Holding urine lets it sit in the bladder longer, turning it into a breeding ground for bacteria. Urinate every 3-4 hours and never hold it when you feel the urge.
💧 Not drinking enough water
Water flushes bacteria out of the urinary tract. Drinking too little makes urine more concentrated and reduces how often you go — aim for at least 6-8 glasses a day.
🧻 Wiping the wrong direction
Wiping back to front (anus toward the urethra) carries gut bacteria straight to the urethra. Always wipe front to back.
🩲 Wearing underwear that traps moisture
Tight or synthetic underwear keeps the genital area damp, creating conditions bacteria thrive in. Choose breathable cotton underwear instead.
🧴 Using harsh intimate cleansing products
Scented soaps, harsh chemicals and vaginal douching disrupt the vagina's balance of protective bacteria, letting harmful bacteria grow more easily.
Sexual activity is a leading risk factor at this age — sometimes called "honeymoon cystitis"
Using spermicide or a diaphragm raises the risk, since both disturb the vagina's bacterial balance
Pregnancy lets the enlarging womb press on the bladder, making urine retention more likely
Post-menopause (over 45 years)
Falling oestrogen thins the lining of the vagina and urethra
Vaginal Lactobacillus declines, losing the body's natural defence
Women aged 65 and over have a cystitis rate of up to ~20%
People with underlying conditions
Diabetes — sugar in the urine feeds bacteria, and immunity is not working at full strength
Weakened immunity — the body fights off pathogens less effectively
Urinary tract stones — block urine flow and cause retention
Enlarged prostate (in men) — presses on the urethra, leaving urine incompletely emptied
📖 How does cystitis differ between women and men? Read the detailed comparison at Cystitis in Women vs Men
Interesting Statistics on What Causes Cystitis
🔬 75-90% of uncomplicated cystitis cases are caused by E. coli
👩 50-60% of women will have cystitis at least once in their lifetime
🔄 27% of women who have had it once will have a recurrence within 6 months
💑 Sexual activity raises the risk 3-4 times in women of reproductive age
🌍 An estimated 404.61 million urinary tract infection cases occurred worldwide in 2019
👵 Women aged 65+ have a cystitis rate of ~20%
Real Experience
Many people who have had cystitis find the cause traces back to everyday habits they overlooked — drinking too little water to avoid frequent bathroom trips at work, holding urine through meetings, or not urinating after sex. Changing these small habits can meaningfully lower the chance of infection.
The main cause is a bacterial infection, especially E. coli from the gut. Less common causes include chemical irritation, radiation therapy, or side effects from certain medicines.
Yes, it does. Holding urine lets it sit in the bladder for longer, turning it into a breeding ground for bacteria. Urinate every 3-4 hours and avoid holding it in when you feel the urge.
Yes, it can. Sexual activity can push bacteria into the urethra, raising the risk 3-4 times. Urinating after every sexual encounter helps flush bacteria out.
Yes, they can, though it is much less common than in women, because men have a longer urethra and a prostate gland that offers some protection. Men who do get it usually have other risk factors, such as an enlarged prostate or a urinary catheter.
Yes, it does. People with diabetes have a higher risk than the general population, because sugar in the urine feeds bacteria and immunity does not work at full strength.
Because falling oestrogen levels thin the lining of the vagina and urethra, and protective bacteria (Lactobacillus) decline, so the body loses its natural defence.
Yes, it does. Spermicide disrupts the vagina's protective bacteria, letting harmful bacteria grow more easily. If cystitis keeps recurring, consider discussing a different contraceptive method with a pharmacist.
Yes, it can. Drinking too little makes urine more concentrated and less frequent, so bacteria are not flushed out of the urinary tract as often. Aim for at least 6-8 glasses of water a day to help lower the risk.
⚠️ Disclaimer
The information on this page is for general informational purposes only and is not intended to replace professional medical advice, diagnosis, or treatment from a qualified doctor or pharmacist. If you have any questions about your symptoms or medication, always consult a doctor or pharmacist first.